215433: Micro-Bioinformatics (Programming part)
Lecturer: Jakramate Bootkrajang
Office hours: 17.00-18.00 Tuesday,Friday @ CSB 107
Email: jakramate.b@cmu.ac.th
Announcements
Worksheet
Link
Class meeting: 28 Jan and 5 Jan 2017
Language:
Python
Material
Outline
Note: All of the materials are from Dalke Scientific Website
1. Introduction to Python
[Slides]
2. String in Python
[Slides]
3. Variables and References in Python
[Slides]
4. Lists and for loop
[Slides1]
[Slides2]
5. The if statement
[Slides]
Exercise 1
Exercise 1
6. Code blocks and indentation
[Slides]
7. Functions
[Slides]
8. Dictionary
[Slides]
9. BioPython module
[Slides1]
[Slides2]
Exercise 2
Exercise 2
Useful resources
Books
Problem Solving with Algorithms and Data Structures Using Python: Brad Miller,David Ranum
[PDF]
Think Python - How to Think Like a Computer Scientist, Allen Downey
[PDF]
Online Material
Introduction to Programming for Bioinformatics in Python
BioPython Tutorial
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